PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG012079.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family bHLH
Protein Properties Length: 221aa    MW: 24817.2 Da    PI: 4.9112
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG012079.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.4e-092272355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                 +  + +E++RR+++++ +++L +llP+ +    ++     +   +A+ +IksL+
  CCG012079.1 22 TERKVIEKNRRNQMKTLYSKLNSLLPNqN---FKEPQPLPDQIDEAISHIKSLE 72
                 56789**********************66...888899999999*******996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.22E-51876No hitNo description
PROSITE profilePS5088810.9181971IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-102088IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-102188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-52372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-42577IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MVENFGGTVI MESSGNISST KTERKVIEKN RRNQMKTLYS KLNSLLPNQN FKEPQPLPDQ  60
IDEAISHIKS LEEKLKKARE KKEGLTSSRK RSYTCTYDPT PIAAPKSPQL KIQELGSALE  120
IVLTSGIDNQ FLFYEIIRIL HEEGVEVVSA NFQVLGDSIF QVLHAQMKES DNGFGAAKVT  180
ERLNMAINGS TSEIELDLEL WDFEIHPGIT GELLTGLEYE T
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011037352.11e-163PREDICTED: transcription factor bHLH118-like
TrEMBLB9N5W41e-142B9N5W4_POPTR; Uncharacterized protein
STRINGPOPTR_0013s13340.11e-142(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-31bHLH family protein